Resources / NGS Data Analysis Tutorial

NGS Data Analysis Tutorial Library

A structured collection of SciBerg tutorials for practical NGS and bioinformatics work: Linux setup, data formats, QC, alignment, DNA-seq, RNA-seq, epigenomics, metagenomics, single-cell and spatial transcriptomics.

ATAC-seq Data AnalysisRead the ATAC-seq Data Analysis tutorial. Bisulfite-seq Data AnalysisRead the Bisulfite-seq Data Analysis tutorial. ChIP-seq Data AnalysisRead the ChIP-seq Data Analysis tutorial. Custom Scripting with Shell/Bash, AWK and PythonRead the Custom Scripting with Shell/Bash, AWK and Python tutorial. Data Sources and Data FormatsRead the Data Sources and Data Formats tutorial. DNA-seq Data AnalysisRead the DNA-seq Data Analysis tutorial. Installing Software for NGS Data AnalysisRead the Installing Software for NGS Data Analysis tutorial. Introduction to Unix Command LineRead the Introduction to Unix Command Line tutorial. Metagenomics Data AnalysisRead the Metagenomics Data Analysis tutorial. Most Popular Sequencing InstrumentsRead the Most Popular Sequencing Instruments tutorial. Quality Control of NGS DataRead the Quality Control of NGS Data tutorial. RNA-seq Data AnalysisRead the RNA-seq Data Analysis tutorial. Setting up Ubuntu/Linux on a Desktop PC or LaptopRead the Setting up Ubuntu/Linux on a Desktop PC or Laptop tutorial. Short Read AlignmentRead the Short Read Alignment tutorial. Single-cell RNA-seq Data AnalysisRead the Single-cell RNA-seq Data Analysis tutorial. Spatial Transcriptomics Data AnalysisRead the Spatial Transcriptomics Data Analysis tutorial.